canis care backend added

Ontology_Based_Information_System/Canis_Care_Backend/.idea/.gitignore

+# Default ignored files
+/shelf/
+/workspace.xml
+# Editor-based HTTP Client requests
+/httpRequests/
+# Datasource local storage ignored files
+/dataSources/
+/dataSources.local.xml

Ontology_Based_Information_System/Canis_Care_Backend/.idea/.name

+CanisCare_Backend
\ No newline at end of file

Ontology_Based_Information_System/Canis_Care_Backend/.idea/CanisCare_Backend.iml

+<?xml version="1.0" encoding="UTF-8"?>
+<module type="PYTHON_MODULE" version="4">
+  <component name="FacetManager">
+    <facet type="django" name="Django">
+      <configuration>
+        <option name="rootFolder" value="$MODULE_DIR$" />
+        <option name="settingsModule" value="djangoProject/settings.py" />
+        <option name="manageScript" value="$MODULE_DIR$/manage.py" />
+        <option name="environment" value="&lt;map/&gt;" />
+        <option name="doNotUseTestRunner" value="false" />
+        <option name="trackFilePattern" value="migrations" />
+      </configuration>
+    </facet>
+  </component>
+  <component name="NewModuleRootManager">
+    <content url="file://$MODULE_DIR$">
+      <excludeFolder url="file://$MODULE_DIR$/venv" />
+    </content>
+    <orderEntry type="inheritedJdk" />
+    <orderEntry type="sourceFolder" forTests="false" />
+  </component>
+  <component name="TemplatesService">
+    <option name="TEMPLATE_CONFIGURATION" value="Django" />
+    <option name="TEMPLATE_FOLDERS">
+      <list>
+        <option value="$MODULE_DIR$/../djangoProject\templates" />
+      </list>
+    </option>
+  </component>
+</module>
\ No newline at end of file

Ontology_Based_Information_System/Canis_Care_Backend/.idea/inspectionProfiles/Project_Default.xml

+<component name="InspectionProjectProfileManager">
+  <profile version="1.0">
+    <option name="myName" value="Project Default" />
+    <inspection_tool class="PyPep8NamingInspection" enabled="true" level="WEAK WARNING" enabled_by_default="true">
+      <option name="ignoredErrors">
+        <list>
+          <option value="N806" />
+        </list>
+      </option>
+    </inspection_tool>
+  </profile>
+</component>
\ No newline at end of file

Ontology_Based_Information_System/Canis_Care_Backend/.idea/inspectionProfiles/profiles_settings.xml

+<component name="InspectionProjectProfileManager">
+  <settings>
+    <option name="USE_PROJECT_PROFILE" value="false" />
+    <version value="1.0" />
+  </settings>
+</component>
\ No newline at end of file

Ontology_Based_Information_System/Canis_Care_Backend/.idea/misc.xml

+<?xml version="1.0" encoding="UTF-8"?>
+<project version="4">
+  <component name="ProjectRootManager" version="2" project-jdk-name="Python 3.10 (djangoProject)" project-jdk-type="Python SDK" />
+</project>
\ No newline at end of file

Ontology_Based_Information_System/Canis_Care_Backend/.idea/modules.xml

+<?xml version="1.0" encoding="UTF-8"?>
+<project version="4">
+  <component name="ProjectModuleManager">
+    <modules>
+      <module fileurl="file://$PROJECT_DIR$/.idea/CanisCare_Backend.iml" filepath="$PROJECT_DIR$/.idea/CanisCare_Backend.iml" />
+    </modules>
+  </component>
+</project>
\ No newline at end of file

Ontology_Based_Information_System/Canis_Care_Backend/api/admin.py

+from django.contrib import admin
+
+from .models import Note
+
+admin.site.register(Note)

Ontology_Based_Information_System/Canis_Care_Backend/api/apps.py

+from django.apps import AppConfig
+
+
+class ApiConfig(AppConfig):
+    default_auto_field = 'django.db.models.BigAutoField'
+    name = 'api'

Ontology_Based_Information_System/Canis_Care_Backend/api/migrations/0001_initial.py

+# Generated by Django 4.1 on 2022-08-25 06:14
+
+from django.db import migrations, models
+
+
+class Migration(migrations.Migration):
+
+    initial = True
+
+    dependencies = [
+    ]
+
+    operations = [
+        migrations.CreateModel(
+            name='Note',
+            fields=[
+                ('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
+                ('body', models.TextField()),
+                ('updated', models.DateTimeField(auto_now=True)),
+                ('created', models.DateTimeField(auto_now_add=True)),
+            ],
+            options={
+                'ordering': ['-updated'],
+            },
+        ),
+    ]

Ontology_Based_Information_System/Canis_Care_Backend/api/models.py

+from django.db import models
+
+
+class Note(models.Model):
+    body = models.TextField()
+    updated = models.DateTimeField(auto_now=True)
+    created = models.DateTimeField(auto_now_add=True)
+
+    def __str__(self):
+        return self.body[0:50]
+
+    class Meta:
+        ordering = ['-updated']

Ontology_Based_Information_System/Canis_Care_Backend/api/serializers.py

+from rest_framework.serializers import ModelSerializer
+from .models import Note
+
+
+class NoteSerializer(ModelSerializer):
+    class Meta:
+        model = Note
+        fields = '__all__'

Ontology_Based_Information_System/Canis_Care_Backend/api/tests.py

+from django.test import TestCase
+
+# Create your tests here.

Ontology_Based_Information_System/Canis_Care_Backend/api/urls.py

+from django.urls import path
+from . import views
+
+urlpatterns = [
+    path('', views.getRoutes),
+    path('notes/', views.getNotes),
+    path('diseases/', views.get_diseases),
+    path('disease/<str:pk>/', views.get_disease_description),
+    path('disease/<str:pk>/<str:pk2>/', views.get_disease_sub),
+    path('disease/<str:pk>/<str:pk2>/<str:pk3>/', views.get_disease_sub_info),
+    path('notes/create/', views.createNote),
+    path('disease/treatment/', views.get_treatment),
+    path('notes/<str:pk>/update/', views.updateNote),
+    path('notes/<str:pk>/delete/', views.deleteNote),
+    path('notes/<str:pk>/', views.getNote),
+
+]

Ontology_Based_Information_System/Canis_Care_Backend/api/views.py

+from rest_framework.decorators import api_view
+from rest_framework.response import Response
+from .serializers import NoteSerializer
+from .models import Note
+from owlready2 import *
+from rdflib import *
+
+# onto = get_ontology("C:\\Users\\LENOVO\\Desktop\\dogSkinDisease.owl").load(reload_if_newer = True)
+# onto = get_ontology(
+#     "C:\\Users\\LENOVO\\Music\\Ontology Generation\\Ontology generation\\Fourth\\Ontology with uppercase disease "
+#     "name\\dogDisease.owl"
+# ).load(
+#     reload_if_newer=True)
+onto = get_ontology("C:\\Users\\LENOVO\\PycharmProjects\\buildOntology\\dogDisease.owl").load(reload_if_newer=True)
+graph = default_world.as_rdflib_graph()
+
+
+@api_view(['GET'])
+def getRoutes(request):
+    routes = [
+        {
+            'EndPoint': '/notes/',
+            'method': 'GET',
+            'body': None,
+            'description': 'Returns an array of notes'
+        },
+        {
+            'EndPoint': '/notes/id',
+            'method': 'GET',
+            'body': None,
+            'description': 'Returns an array of notes'
+        },
+        {
+            'EndPoint': '/decease/treatment/',
+            'method': 'POST',
+            'body': {'decease': ""},
+            'description': 'Get treatments for the decease'
+        },
+        {
+            'EndPoint': '/notes/id/update/',
+            'method': 'PUT',
+            'body': {'body': ""},
+            'description': 'Updates an existing record with data sent in put request'
+        },
+        {
+            'EndPoint': '/notes/id/delete',
+            'method': 'DELETE',
+            'body': None,
+            'description': 'Deletes any existing note'
+        }
+    ]
+    return Response(routes)
+
+
+@api_view(['GET'])
+def getNotes(request):
+    notes = Note.objects.all()
+    serializer = NoteSerializer(notes, many=True)
+
+    return Response(serializer.data)
+
+
+@api_view(['GET'])
+def getNote(request, pk):
+    notes = Note.objects.get(id=pk)
+    serializer = NoteSerializer(notes, many=False)
+    return Response(serializer.data)
+
+
+@api_view(['GET'])
+def get_disease_description(request, pk):
+    disease_description = list(graph.query(
+        """
+        SELECT ?description 
+	    WHERE {  ?disease <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#NamedDisease>;
+	    FILTER(?disease = <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogDisease.owl#"""+pk+""">).
+	    ?disease <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#hasDescription> ?description.
+        }"""
+    ))
+
+    new_disease_description = [str(x[0]) for x in disease_description]
+    new_disease_description = ' '.join(new_disease_description)
+    new_disease_description = new_disease_description.split('.')
+    new_disease_description = new_disease_description[1:-1]
+    print(new_disease_description)
+
+    return Response(new_disease_description)
+
+
+@api_view(['GET'])
+def get_disease_sub_info(request, pk, pk2, pk3):
+    global sci_name
+
+    new_pk2 = pk2[:-1]
+    if pk == "Dandruff":
+        sci_name = "seborrheic dermatitis"
+    elif pk == "Ringworm":
+        sci_name = "dermatophytes"
+    elif pk == "YeastInfection":
+        sci_name = "Malassezia pachydermatitis"
+
+    sub_list_info = list(graph.query(
+        """
+        SELECT ?treatdescribe
+        WHERE {  ?disease <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#NamedDisease>;
+        FILTER((?disease = <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogDisease.owl#""" + pk + """>) && (?treat = <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogDisease.owl#""" + pk3 + """>)).
+        	    ?disease <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#has""" + new_pk2 + """> ?treat.
+        	    ?treat <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#has""" + new_pk2 + """Description> ?treatdescribe.
+                }"""))
+
+    new_sub_list_info = [str(x[0]) for x in sub_list_info]
+    new_sub_list_info = ' '.join(new_sub_list_info)
+    new_sub_list_info = new_sub_list_info.split('.')
+    new_sub_list_info = new_sub_list_info[1:-1]
+    print(new_sub_list_info)
+
+    return Response(new_sub_list_info)
+
+
+@api_view(['GET'])
+def get_disease_sub(request, pk, pk2):
+    new_pk2 = pk2[:-1]
+
+    sub_list = list(graph.query(
+        """
+        SELECT ?treat
+	    WHERE {  ?disease <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#NamedDisease>;
+	    FILTER(?disease = <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogDisease.owl#""" + pk + """>).
+	    ?disease <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#has""" + new_pk2 + """> ?treat.
+        }"""))
+
+    new_sub_list = [str(x[0]) for x in sub_list]
+    fin_sub_list = []
+
+    for y in new_sub_list:
+        itm = y[y.find('#'):][1:]
+        fin_sub_list.append(itm)
+
+    return Response(new_sub_list)
+
+
+@api_view(['GET'])
+def get_diseases(request):
+    des_list = list(graph.query("""
+                SELECT ?disease
+                WHERE {
+                ?disease <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#NamedDisease> .
+                }"""))
+    new_des_list = [str(x[0]) for x in des_list]
+    # index = []
+    # for y in range(len(new_list)):
+    #     index.append(y + 1)
+    #
+    # print(index)
+    # disease_dict = dict.fromkeys(new_list, "disease")
+    # index_dict = dict.fromkeys(index, "id")
+    # d1 = dict(enumerate(new_list))
+    # print(disease_dict)
+    # print(index_dict)
+    fin_des_list = []
+
+    for y in new_des_list:
+        des = y[y.find('#'):][1:]
+        fin_des_list.append(des)
+
+    print(fin_des_list)
+    return Response(fin_des_list)
+
+
+@api_view(['POST'])
+def get_treatment(request):
+    data = request.data
+    disease = data['disease']
+    res = list(graph.query("""
+                SELECT ?disease ?treat ?treatdescribe 
+	            WHERE {  ?disease <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#hasScientificName> ?o;
+	            FILTER(REGEX(?o, \"""" + disease + """\", "i")).
+	            ?disease <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#hasTreatment> ?treat.
+	            ?treat <http://www.semanticweb.org/dogdisease/ontologies/2022/4/dogSkinDisease#hasTreatmentDescription> ?treatdescribe.
+                }"""))
+    return Response(res)
+
+
+@api_view(['PUT'])
+def updateNote(request, pk):
+    data = request.data
+
+    note = Note.objects.get(id=pk)
+    serializer = NoteSerializer(note, data=request.data)
+    if serializer.is_valid():
+        serializer.save()
+    return Response(serializer.data)
+
+
+@api_view(['POST'])
+def createNote(request):
+    data = request.data
+
+    note = Note.objects.create(
+        body=data['body']
+    )
+    serializer = NoteSerializer(note, many=False)
+
+    return Response(serializer.data)
+
+
+@api_view(['DELETE'])
+def deleteNote(request, pk):
+    data = request.data
+
+    note = Note.objects.get(id=pk)
+    note.delete()
+    return Response("Note has been deleted!")

Ontology_Based_Information_System/Canis_Care_Backend/djangoProject/asgi.py

+"""
+ASGI config for djangoProject project.
+
+It exposes the ASGI callable as a module-level variable named ``application``.
+
+For more information on this file, see
+https://docs.djangoproject.com/en/4.1/howto/deployment/asgi/
+"""
+
+import os
+
+from django.core.asgi import get_asgi_application
+
+os.environ.setdefault('DJANGO_SETTINGS_MODULE', 'djangoProject.settings')
+
+application = get_asgi_application()

Ontology_Based_Information_System/Canis_Care_Backend/djangoProject/settings.py

+"""
+Django settings for djangoProject project.
+
+Generated by 'django-admin startproject' using Django 4.1.
+
+For more information on this file, see
+https://docs.djangoproject.com/en/4.1/topics/settings/
+
+For the full list of settings and their values, see
+https://docs.djangoproject.com/en/4.1/ref/settings/
+"""
+
+from pathlib import Path
+
+# Build paths inside the project like this: BASE_DIR / 'subdir'.
+BASE_DIR = Path(__file__).resolve().parent.parent
+
+# Quick-start development settings - unsuitable for production
+# See https://docs.djangoproject.com/en/4.1/howto/deployment/checklist/
+
+# SECURITY WARNING: keep the secret key used in production secret!
+SECRET_KEY = 'django-insecure-3ts!3sf#jntwaa-9r(^t%7ty=nc03p_eil3yha%#hinc30b&ww'
+
+# SECURITY WARNING: don't run with debug turned on in production!
+DEBUG = True
+
+ALLOWED_HOSTS = ['192.168.1.102', '192.168.1.101', '192.168.1.5', '192.168.1.100']
+
+# Application definition
+
+
+INSTALLED_APPS = [
+    'django.contrib.admin',
+    'django.contrib.auth',
+    'django.contrib.contenttypes',
+    'django.contrib.sessions',
+    'django.contrib.messages',
+    'django.contrib.staticfiles',
+
+    'api.apps.ApiConfig',
+
+    'rest_framework',
+
+    'corsheaders'
+]
+
+MIDDLEWARE = [
+    'django.middleware.security.SecurityMiddleware',
+
+    "corsheaders.middleware.CorsMiddleware",
+
+    'django.contrib.sessions.middleware.SessionMiddleware',
+    'django.middleware.common.CommonMiddleware',
+    'django.middleware.csrf.CsrfViewMiddleware',
+    'django.contrib.auth.middleware.AuthenticationMiddleware',
+    'django.contrib.messages.middleware.MessageMiddleware',
+    'django.middleware.clickjacking.XFrameOptionsMiddleware',
+]
+
+ROOT_URLCONF = 'djangoProject.urls'
+
+TEMPLATES = [
+    {
+        'BACKEND': 'django.template.backends.django.DjangoTemplates',
+        'DIRS': [BASE_DIR / 'templates']
+        ,
+        'APP_DIRS': True,
+        'OPTIONS': {
+            'context_processors': [
+                'django.template.context_processors.debug',
+                'django.template.context_processors.request',
+                'django.contrib.auth.context_processors.auth',
+                'django.contrib.messages.context_processors.messages',
+            ],
+        },
+    },
+]
+
+WSGI_APPLICATION = 'djangoProject.wsgi.application'
+
+# Database
+# https://docs.djangoproject.com/en/4.1/ref/settings/#databases
+
+DATABASES = {
+    'default': {
+        'ENGINE': 'django.db.backends.sqlite3',
+        'NAME': BASE_DIR / 'db.sqlite3',
+    }
+}
+
+# Password validation
+# https://docs.djangoproject.com/en/4.1/ref/settings/#auth-password-validators
+
+AUTH_PASSWORD_VALIDATORS = [
+    {
+        'NAME': 'django.contrib.auth.password_validation.UserAttributeSimilarityValidator',
+    },
+    {
+        'NAME': 'django.contrib.auth.password_validation.MinimumLengthValidator',
+    },
+    {
+        'NAME': 'django.contrib.auth.password_validation.CommonPasswordValidator',
+    },
+    {
+        'NAME': 'django.contrib.auth.password_validation.NumericPasswordValidator',
+    },
+]
+
+# Internationalization
+# https://docs.djangoproject.com/en/4.1/topics/i18n/
+
+LANGUAGE_CODE = 'en-us'
+
+TIME_ZONE = 'UTC'
+
+USE_I18N = True
+
+USE_TZ = True
+
+# Static files (CSS, JavaScript, Images)
+# https://docs.djangoproject.com/en/4.1/howto/static-files/
+
+STATIC_URL = 'static/'
+
+# Default primary key field type
+# https://docs.djangoproject.com/en/4.1/ref/settings/#default-auto-field
+
+DEFAULT_AUTO_FIELD = 'django.db.models.BigAutoField'
+
+CORS_ALLOW_ALL_ORIGINS = True

Ontology_Based_Information_System/Canis_Care_Backend/djangoProject/urls.py

+from django.contrib import admin
+from django.urls import path,include
+
+urlpatterns = [
+    path('admin/', admin.site.urls),
+    path('', include('api.urls'))
+]

Ontology_Based_Information_System/Canis_Care_Backend/djangoProject/wsgi.py

+"""
+WSGI config for djangoProject project.
+
+It exposes the WSGI callable as a module-level variable named ``application``.
+
+For more information on this file, see
+https://docs.djangoproject.com/en/4.1/howto/deployment/wsgi/
+"""
+
+import os
+
+from django.core.wsgi import get_wsgi_application
+
+os.environ.setdefault('DJANGO_SETTINGS_MODULE', 'djangoProject.settings')
+
+application = get_wsgi_application()

Ontology_Based_Information_System/Canis_Care_Backend/manage.py

+#!/usr/bin/env python
+"""Django's command-line utility for administrative tasks."""
+import os
+import sys
+from owlready2 import *
+
+
+def main():
+    """Run administrative tasks."""
+    os.environ.setdefault('DJANGO_SETTINGS_MODULE', 'djangoProject.settings')
+
+    # onto = get_ontology("C:\\Users\\LENOVO\\Documents\\Research\\dogSkinDisease.owl").load()
+    #
+    # default_world.set_backend(filename="disease.sqlite3")
+
+    try:
+        from django.core.management import execute_from_command_line
+    except ImportError as exc:
+        raise ImportError(
+            "Couldn't import Django. Are you sure it's installed and "
+            "available on your PYTHONPATH environment variable? Did you "
+            "forget to activate a virtual environment?"
+        ) from exc
+    execute_from_command_line(sys.argv)
+
+
+if __name__ == '__main__':
+    main()